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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170026126
CDTW01018473
80614
Bacteroidota
>WENV170026014
CDTW01010186
97336
Bacteroidota
CAG
Leu
>WENV170025901
CDTW01001895
59689
Bacteroidota
CAG
Leu
>WENV170025916
CDTW01002640
243025
Bacteroidota
CAT
Met
>WENV170026146
CDTW01019797
243025
Bacteroidota
CAT
Met
>WENV170026130
CDTW01018654
338486
Bacteroidota
CAT
Met
>WENV170026350
CDTW01035918
338486
Bacteroidota
CAT
Met
>WENV170026515
CDTW01047496
144695
Bacteroidota
CAT
Met
>WENV170025988
CDTW01008320
235207
Bacteroidota
CAT
Met
>WENV170026424
CDTW01040018
154643
Bacteroidota
CAT
Met
>WENV170025957
CDTW01005645
154643
Bacteroidota
CAT
Met
>WENV170026047
CDTW01013172
301449
Bacteroidota
CGG
Pro
>WENV170026496
CDTW01046039
344769
Bacteroidota
CTC
Glu
>WENV170026269
CDTW01030301
413663
Bacteroidota
CTG
Gln
>WENV170026417
CDTW01039273
425638
Bacteroidota
CTG
Gln
>WENV170026107
CDTW01016928
414426
Bacteroidota
CTG
Gln
>WENV170025903
CDTW01002101
414426
Bacteroidota
CTG
Gln
>WENV170026279
CDTW01031505
313363
Bacteroidota
GAA
Phe
>WENV170026164
CDTW01021559
17323
Bacteroidota
GGA
Ser
>WENV170026581
CDTW01051712
19528
Bacteroidota
GGA
Ser
>WENV170026131
CDTW01018660
151960
Bacteroidota
GGC
Ala
>WENV170026271
CDTW01030658
139743
Bacteroidota
GGG
Pro
>WENV170026261
CDTW01029187
344692
Bacteroidota
GGT
Thr
>WENV170026512
CDTW01047111
144590
Bacteroidota
GTT
Asn
>WENV170026511
CDTW01047111
144590
Bacteroidota
GTT
Asn
>WENV170026510
CDTW01047111
144590
Bacteroidota
GTT
Asn
>WENV170026509
CDTW01047111
144590
Bacteroidota
GTT
Asn
>WENV170026013
CDTW01010122
144590
Bacteroidota
GTT
Asn
>WENV170026585
CDTW01052087
37076
Bacteroidota
TAA
Leu
>WENV170026163
CDTW01021558
44852
Bacteroidota
TAA
Leu
>WENV170026081
CDTW01014830
44852
Bacteroidota
TAA
Leu
>WENV170026363
CDTW01036378
136244
Bacteroidota
TAC
Val
>WENV170026362
CDTW01036378
136244
Bacteroidota
TAC
Val
>WENV170026361
CDTW01036378
136244
Bacteroidota
TAC
Val
>WENV170026338
CDTW01034711
136244
Bacteroidota
TAC
Val
>WENV170026337
CDTW01034711
136244
Bacteroidota
TAC
Val
>WENV170025937
CDTW01004176
145504
Bacteroidota
TGT
Thr
>WENV170026471
CDTW01043707
338164
Bacteroidota
TTC
Glu
>WENV170026260
CDTW01029187
353927
Bacteroidota
TTC
Glu
>WENV170025924
CDTW01003438
353927
Bacteroidota
TTC
Glu
>WENV170026470
CDTW01043370
415558
Bacteroidota
TTG
Gln
>WENV170026224
CDTW01027476
235097
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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