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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170029952
CDYH01007996
159235
Bacillota
GTC
Asp
>WENV170030077
CDYH01018725
260820
Bacillota
TGC
Ala
>WENV170029994
CDYH01010598
88717
Bacillota
GTA
Tyr
>WENV170030022
CDYH01012301
88717
Bacillota
GTA
Tyr
>WENV170029989
CDYH01010061
159242
Bacillota
CCG
Arg
>WENV170029951
CDYH01007996
269960
Bacillota
CCA
Trp
>WENV170029931
CDYH01006551
286917
Bacillota
TGC
Ala
>WENV170029975
CDYH01009314
286917
Bacillota
TGC
Ala
>WENV170029812
CDYH01001320
448255
Bacillota
CTG
Gln
>WENV170029893
CDYH01005603
159234
Bacillota
CAC
Val
>WENV170029997
CDYH01010896
159234
Bacillota
CAC
Val
>WENV170029930
CDYH01006551
159433
Bacillota
GAT
Ile
>WENV170030036
CDYH01013426
159237
Bacillota
TCT
Arg
>WENV170030072
CDYH01017749
257977
Bacillota
CGT
Thr
>WENV170030112
CDYH01021810
369393
Bacillota
TTC
Glu
>WENV170030038
CDYH01013664
64857
Bacillota
TAA
Leu
>WENV170030071
CDYH01017732
369390
Bacillota
TGT
Thr
>WENV170029948
CDYH01007718
11993
Bacillota
GGA
Ser
>WENV170029860
CDYH01003673
49796
Bacillota
TGA
Ser
>WENV170029859
CDYH01003673
159344
Bacillota
>WENV170029861
CDYH01003673
5393
Bacillota
GCT
Ser
>WENV170029844
CDYH01002734
159236
Bacillota
GTT
Asn
>WENV170030125
CDYH01023293
257976
Bacillota
CCC
Gly
>WENV170029817
CDYH01001637
276063
Bacillota
CTC
Glu
>WENV170030021
CDYH01012283
159345
Bacillota
GAT
Ile
>WENV170029950
CDYH01007935
369392
Bacillota
GCA
Cys
>WENV170030068
CDYH01017712
257965
Bacillota
TGG
Pro
>WENV170030065
CDYH01016985
64855
Bacillota
CAG
Leu
>WENV170030037
CDYH01013426
159238
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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