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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170041513
CDYT01013391
190892
Actinomycetota
CAT
Met
>WENV170041219
CDYT01005174
105929
Actinomycetota
GTA
Tyr
>WENV170041892
CDYT01027829
69295
Actinomycetota
CAG
Leu
>WENV170041356
CDYT01009297
162410
Actinomycetota
TCT
Arg
>WENV170041944
CDYT01029293
257345
Actinomycetota
CCT
Arg
>WENV170041812
CDYT01024506
26695
Actinomycetota
GAG
Leu
>WENV170041709
CDYT01020905
139249
Actinomycetota
GTC
Asp
>WENV170041694
CDYT01020141
58412
Actinomycetota
CGA
Ser
>WENV170041821
CDYT01024948
167861
Actinomycetota
CAA
Leu
>WENV170041211
CDYT01004998
162417
Actinomycetota
CGG
Pro
>WENV170041579
CDYT01015486
18633
Actinomycetota
CGA
Ser
>WENV170041614
CDYT01017410
159159
Actinomycetota
TGG
Pro
>WENV170041797
CDYT01023719
162414
Actinomycetota
GAT
Ile
>WENV170041323
CDYT01008749
26694
Actinomycetota
TGA
Ser
>WENV170041220
CDYT01005174
261300
Actinomycetota
GGT
Thr
>WENV170041150
CDYT01002979
449079
Actinomycetota
CTG
Gln
>WENV170041333
CDYT01008984
162413
Actinomycetota
TTC
Glu
>WENV170042055
CDYT01033336
261307
Actinomycetota
TAC
Val
>WENV170041081
CDYT01000811
257872
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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