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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170077864
CDZV01000489
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170077866
CDZV01000490
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170078813
CDZV01040719
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170078981
CDZV01045861
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170078963
CDZV01044700
270464
Thermodesulfobacteriota
GGT
Thr
>WENV170078964
CDZV01044700
270464
Thermodesulfobacteriota
GGT
Thr
>WENV170078221
CDZV01014560
205579
Thermodesulfobacteriota
ACG
Arg
>WENV170078707
CDZV01035589
205579
Thermodesulfobacteriota
ACG
Arg
>WENV170078814
CDZV01040722
170962
Thermodesulfobacteriota
CAT
Met
>WENV170078815
CDZV01040722
170962
Thermodesulfobacteriota
CAT
Met
>WENV170078473
CDZV01026336
268423
Thermodesulfobacteriota
>WENV170078573
CDZV01031377
170965
Thermodesulfobacteriota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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