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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170150830
CEOC01161417
37357
Cyanobacteriota
TAA
Leu
>WENV170151190
CEOC01248767
96363
Cyanobacteriota
TAG
Leu
>WENV170150215
CEOC01096642
349164
Cyanobacteriota
TGT
Thr
>WENV170149251
CEOC01013039
149253
Cyanobacteriota
ACG
Arg
>WENV170151101
CEOC01209866
363933
Cyanobacteriota
GTT
Asn
>WENV170149877
CEOC01063838
23971
Cyanobacteriota
TGA
Ser
>WENV170151163
CEOC01234302
352687
Cyanobacteriota
GAC
Val
>WENV170150664
CEOC01147733
252089
Cyanobacteriota
GTG
His
>WENV170150602
CEOC01143219
11030
Cyanobacteriota
GCT
Ser
>WENV170149786
CEOC01055446
240100
Cyanobacteriota
CAT
Met
>WENV170149380
CEOC01024533
158847
Cyanobacteriota
GAT
Ile
>WENV170150410
CEOC01121873
147238
Cyanobacteriota
CCG
Arg
>WENV170150184
CEOC01093745
341034
Cyanobacteriota
GGT
Thr
>WENV170151336
CEOC01304264
145893
Cyanobacteriota
CAT
Met
>WENV170149784
CEOC01055294
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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