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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170196308
CEPK01036171
149985
Alphaproteobacteria
ACG
Arg
>WENV170197952
CEPK01180909
144964
Alphaproteobacteria
TGG
Pro
>WENV170197858
CEPK01174415
23468
Alphaproteobacteria
GCT
Ser
>WENV170196227
CEPK01031679
339722
Alphaproteobacteria
TTG
Gln
>WENV170197823
CEPK01171944
281594
Alphaproteobacteria
TGT
Thr
>WENV170197616
CEPK01155475
266073
Alphaproteobacteria
TTT
Lys
>WENV170197667
CEPK01159520
152248
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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