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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170200716
CEPO01011901
235887
Gammaproteobacteria
GTG
His
>WENV170200806
CEPO01040346
113631
Gammaproteobacteria
GTA
Tyr
>WENV170200718
CEPO01011970
149035
Gammaproteobacteria
CCG
Arg
>WENV170200804
CEPO01040287
58822
Gammaproteobacteria
CAA
Leu
>WENV170200726
CEPO01014243
145196
Gammaproteobacteria
CAT
Met
>WENV170200636
CEPO01000691
185163
Gammaproteobacteria
ACG
Arg
>WENV170200637
CEPO01000691
185163
Gammaproteobacteria
ACG
Arg
>WENV170200807
CEPO01040346
338534
Gammaproteobacteria
TCC
Gly
>WENV170200648
CEPO01002221
412799
Gammaproteobacteria
GCA
Cys
>WENV170200661
CEPO01003458
340801
Gammaproteobacteria
CCT
Arg
>WENV170200651
CEPO01002492
252289
Gammaproteobacteria
TTT
Lys
>WENV170200801
CEPO01039666
145237
Gammaproteobacteria
CAT
Met
>WENV170200670
CEPO01004963
279906
Gammaproteobacteria
TGC
Ala
>WENV170200714
CEPO01011901
186449
Gammaproteobacteria
TGG
Pro
>WENV170200646
CEPO01001692
59658
Gammaproteobacteria
CAA
Leu
>WENV170200827
CEPO01045619
237421
Gammaproteobacteria
TGT
Thr
>WENV170200815
CEPO01042232
182592
Gammaproteobacteria
GAC
Val
>WENV170200809
CEPO01041212
149037
Gammaproteobacteria
GAC
Val
>WENV170200733
CEPO01014831
149037
Gammaproteobacteria
GAC
Val
>WENV170200674
CEPO01005565
411735
Gammaproteobacteria
GCA
Cys
>WENV170200759
CEPO01016130
45411
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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