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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170210941
CEPW01025556
147089
Alphaproteobacteria
ACG
Arg
>WENV170211021
CEPW01032012
282595
Alphaproteobacteria
CCA
Trp
>WENV170212251
CEPW01164045
282595
Alphaproteobacteria
CCA
Trp
>WENV170211387
CEPW01064191
435528
Alphaproteobacteria
GCA
Cys
>WENV170211921
CEPW01122785
338282
Alphaproteobacteria
GTT
Asn
>WENV170212878
CEPW01310270
339722
Alphaproteobacteria
TTG
Gln
>WENV170212038
CEPW01138114
194755
Alphaproteobacteria
CAT
Met
>WENV170212520
CEPW01183286
348781
Alphaproteobacteria
GAA
Phe
>WENV170212407
CEPW01177006
319925
Alphaproteobacteria
TGT
Thr
>WENV170212277
CEPW01166628
319925
Alphaproteobacteria
TGT
Thr
>WENV170212250
CEPW01164042
319925
Alphaproteobacteria
TGT
Thr
>WENV170212098
CEPW01145111
319925
Alphaproteobacteria
TGT
Thr
>WENV170211609
CEPW01089207
266073
Alphaproteobacteria
TTT
Lys
>WENV170210642
CEPW01002568
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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