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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170210689
CEPW01005682
313881
Gammaproteobacteria
GGC
Ala
>WENV170211386
CEPW01064048
313881
Gammaproteobacteria
GGC
Ala
>WENV170211695
CEPW01097997
443007
Gammaproteobacteria
CCC
Gly
>WENV170212886
CEPW01311613
61925
Gammaproteobacteria
TAA
Leu
>WENV170211965
CEPW01129635
160030
Gammaproteobacteria
GGG
Pro
>WENV170211421
CEPW01068093
171935
Gammaproteobacteria
ACG
Arg
>WENV170210832
CEPW01018384
185163
Gammaproteobacteria
ACG
Arg
>WENV170211892
CEPW01119296
245602
Gammaproteobacteria
TTT
Lys
>WENV170210807
CEPW01017107
322642
Gammaproteobacteria
GGT
Thr
>WENV170210793
CEPW01015400
322642
Gammaproteobacteria
GGT
Thr
>WENV170212211
CEPW01160193
202944
Gammaproteobacteria
TGG
Pro
>WENV170211204
CEPW01047841
199268
Gammaproteobacteria
ACG
Arg
>WENV170211203
CEPW01047841
199268
Gammaproteobacteria
ACG
Arg
>WENV170211941
CEPW01125190
240084
Gammaproteobacteria
GGT
Thr
>WENV170212871
CEPW01309622
10767
Gammaproteobacteria
GCT
Ser
>WENV170210911
CEPW01023532
145713
Gammaproteobacteria
CAT
Met
>WENV170211036
CEPW01032859
195303
Gammaproteobacteria
GAT
Ile
>WENV170212413
CEPW01177154
128930
Gammaproteobacteria
GTC
Asp
>WENV170211812
CEPW01109923
59658
Gammaproteobacteria
CAA
Leu
>WENV170212598
CEPW01219599
23669
Gammaproteobacteria
GCT
Ser
>WENV170212515
CEPW01180625
45411
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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