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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170234153
CEQK01013990
235887
Gammaproteobacteria
GTG
His
>WENV170234219
CEQK01023196
279385
Gammaproteobacteria
TTT
Lys
>WENV170234311
CEQK01038378
58822
Gammaproteobacteria
CAA
Leu
>WENV170234278
CEQK01033086
59177
Gammaproteobacteria
TAA
Leu
>WENV170234317
CEQK01039525
163940
Gammaproteobacteria
CCG
Arg
>WENV170234055
CEQK01001400
240619
Gammaproteobacteria
TGT
Thr
>WENV170234232
CEQK01026068
147122
Gammaproteobacteria
GGG
Pro
>WENV170234143
CEQK01012218
16284
Gammaproteobacteria
TGA
Ser
>WENV170234402
CEQK01054147
159514
Gammaproteobacteria
TGG
Pro
>WENV170234185
CEQK01017213
145369
Gammaproteobacteria
CGG
Pro
>WENV170234059
CEQK01001783
174801
Gammaproteobacteria
TGG
Pro
>WENV170234524
CEQK01077054
289927
Gammaproteobacteria
GAA
Phe
>WENV170234156
CEQK01014190
199268
Gammaproteobacteria
ACG
Arg
>WENV170234101
CEQK01006740
147055
Gammaproteobacteria
TGG
Pro
>WENV170234636
CEQK01117935
237412
Gammaproteobacteria
TAC
Val
>WENV170234468
CEQK01067011
145365
Gammaproteobacteria
GAC
Val
>WENV170234647
CEQK01120438
241136
Gammaproteobacteria
TTG
Gln
>WENV170234168
CEQK01014956
235886
Gammaproteobacteria
TTC
Glu
>WENV170234277
CEQK01033086
412230
Gammaproteobacteria
GCA
Cys
>WENV170234538
CEQK01079340
240082
Gammaproteobacteria
TTT
Lys
>WENV170234222
CEQK01023902
240082
Gammaproteobacteria
TTT
Lys
>WENV170234152
CEQK01013860
243921
Gammaproteobacteria
TTT
Lys
>WENV170234408
CEQK01055231
175964
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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