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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170249184
CEQR01107896
117444
Bacteroidota
GTA
Tyr
>WENV170249148
CEQR01102037
132066
Bacteroidota
CAA
Leu
>WENV170249159
CEQR01104020
448526
Bacteroidota
TTG
Gln
>WENV170249188
CEQR01108175
145892
Bacteroidota
TAC
Val
>WENV170249137
CEQR01099546
316880
Bacteroidota
GAA
Phe
>WENV170249208
CEQR01110110
12157
Bacteroidota
GCT
Ser
>WENV170249088
CEQR01083930
160922
Bacteroidota
GTG
His
>WENV170249016
CEQR01050055
161475
Bacteroidota
TCG
Arg
>WENV170248946
CEQR01006447
57357
Bacteroidota
TGA
Ser
>WENV170248971
CEQR01019161
67292
Bacteroidota
GAG
Leu
>WENV170249191
CEQR01108301
258133
Bacteroidota
>WENV170249195
CEQR01109027
139057
Bacteroidota
GAC
Val
>WENV170249209
CEQR01110110
144149
Bacteroidota
TGG
Pro
>WENV170249219
CEQR01110604
161858
Bacteroidota
GGG
Pro
>WENV170249211
CEQR01110166
158528
Bacteroidota
>WENV170249157
CEQR01103902
172819
Bacteroidota
>WENV170249065
CEQR01075276
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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