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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170267090
CERF01000580
161005
Alphaproteobacteria
GAC
Val
>WENV170267282
CERF01040932
448621
Alphaproteobacteria
GCA
Cys
>WENV170267268
CERF01038018
291340
Alphaproteobacteria
CGT
Thr
>WENV170267339
CERF01071122
259905
Alphaproteobacteria
CCA
Trp
>WENV170267355
CERF01080961
88964
Alphaproteobacteria
CAA
Leu
>WENV170267121
CERF01007081
161011
Alphaproteobacteria
ACG
Arg
>WENV170267166
CERF01015005
8431
Alphaproteobacteria
GCT
Ser
>WENV170267184
CERF01019667
26445
Alphaproteobacteria
GGA
Ser
>WENV170267276
CERF01039794
259902
Alphaproteobacteria
GGC
Ala
>WENV170267157
CERF01013877
259904
Alphaproteobacteria
TTT
Lys
>WENV170267189
CERF01021687
370458
Alphaproteobacteria
GGT
Thr
>WENV170267281
CERF01040788
274512
Alphaproteobacteria
CCA
Trp
>WENV170267350
CERF01079724
105590
Alphaproteobacteria
TAG
Leu
>WENV170267310
CERF01053716
161013
Alphaproteobacteria
TGT
Thr
>WENV170267328
CERF01063442
169921
Alphaproteobacteria
CCT
Arg
>WENV170267344
CERF01074687
161006
Alphaproteobacteria
TGG
Pro
>WENV170267151
CERF01012548
26444
Alphaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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