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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170272546
CERK01130491
189987
Bacteroidota
TCT
Arg
>WENV170272203
CERK01052232
109317
Bacteroidota
CAA
Leu
>WENV170271853
CERK01013385
139505
Bacteroidota
TAC
Val
>WENV170272158
CERK01046784
139505
Bacteroidota
TAC
Val
>WENV170272227
CERK01055608
449969
Bacteroidota
GCA
Cys
>WENV170272265
CERK01060265
116954
Bacteroidota
TAG
Leu
>WENV170272207
CERK01052851
161475
Bacteroidota
TCG
Arg
>WENV170271932
CERK01020905
95721
Bacteroidota
GTA
Tyr
>WENV170272568
CERK01134479
448855
Bacteroidota
GCA
Cys
>WENV170271881
CERK01015923
263627
Bacteroidota
TTG
Gln
>WENV170272248
CERK01059065
263627
Bacteroidota
TTG
Gln
>WENV170272251
CERK01059464
263627
Bacteroidota
TTG
Gln
>WENV170271905
CERK01018286
144149
Bacteroidota
TGG
Pro
>WENV170272142
CERK01045470
144149
Bacteroidota
TGG
Pro
>WENV170271746
CERK01003815
241763
Bacteroidota
CAT
Met
>WENV170271693
CERK01000241
168483
Bacteroidota
GTT
Asn
>WENV170272126
CERK01042666
168483
Bacteroidota
GTT
Asn
>WENV170271796
CERK01007887
310118
Bacteroidota
CCA
Trp
>WENV170271774
CERK01005936
23145
Bacteroidota
GGA
Ser
>WENV170272544
CERK01129693
106218
Bacteroidota
CAA
Leu
>WENV170272316
CERK01065832
18750
Bacteroidota
GGA
Ser
>WENV170272154
CERK01046463
325477
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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