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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170272351
CERK01069159
165001
Bacteroidota
GTT
Asn
>WENV170271905
CERK01018286
139286
Bacteroidota
TGG
Pro
>WENV170272142
CERK01045470
139286
Bacteroidota
TGG
Pro
>WENV170271933
CERK01020905
322068
Bacteroidota
TCC
Gly
>WENV170271693
CERK01000241
190649
Bacteroidota
GTT
Asn
>WENV170272126
CERK01042666
190649
Bacteroidota
GTT
Asn
>WENV170272154
CERK01046463
320640
Bacteroidota
TTG
Gln
>WENV170271746
CERK01003815
163646
Bacteroidota
CAT
Met
>WENV170271774
CERK01005936
17496
Bacteroidota
GGA
Ser
>WENV170272093
CERK01037986
240901
Bacteroidota
TTT
Lys
>WENV170271916
CERK01019099
193473
Bacteroidota
GTC
Asp
>WENV170272541
CERK01128969
127216
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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