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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170279285
CERR01010764
262571
Bacteroidota
GCC
Gly
>WENV170279314
CERR01011672
21418
Bacteroidota
GGA
Ser
>WENV170279408
CERR01018477
139231
Bacteroidota
GAC
Val
>WENV170279449
CERR01021792
57357
Bacteroidota
TGA
Ser
>WENV170279468
CERR01023484
18750
Bacteroidota
GGA
Ser
>WENV170279502
CERR01026985
263627
Bacteroidota
TTG
Gln
>WENV170279516
CERR01028936
177164
Bacteroidota
GTC
Asp
>WENV170279581
CERR01036293
116954
Bacteroidota
TAG
Leu
>WENV170279630
CERR01041684
119207
Bacteroidota
TAG
Leu
>WENV170279666
CERR01044243
232558
Bacteroidota
TGT
Thr
>WENV170279861
CERR01063038
139484
Bacteroidota
TAC
Val
>WENV170279959
CERR01076364
321470
Bacteroidota
GAA
Phe
>WENV170279988
CERR01078190
213847
Bacteroidota
GTT
Asn
>WENV170280015
CERR01083265
263627
Bacteroidota
TTG
Gln
>WENV170280113
CERR01092834
172034
Bacteroidota
TGT
Thr
>WENV170280115
CERR01093175
301008
Bacteroidota
TTG
Gln
>WENV170280144
CERR01096880
219678
Bacteroidota
CAT
Met
>WENV170280187
CERR01103676
310118
Bacteroidota
CCA
Trp
>WENV170280263
CERR01111709
310118
Bacteroidota
CCA
Trp
>WENV170280423
CERR01125184
109317
Bacteroidota
CAA
Leu
>WENV170280444
CERR01125776
116954
Bacteroidota
TAG
Leu
>WENV170280804
CERR01263362
188048
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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