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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170283594
CERU01038305
158433
Gammaproteobacteria
ACG
Arg
>WENV170283468
CERU01016643
261991
Gammaproteobacteria
TTT
Lys
>WENV170283585
CERU01037892
256881
Gammaproteobacteria
GTG
His
>WENV170283635
CERU01045014
64904
Gammaproteobacteria
CAA
Leu
>WENV170283343
CERU01001205
18367
Gammaproteobacteria
GCT
Ser
>WENV170283785
CERU01111612
160115
Gammaproteobacteria
GGG
Pro
>WENV170283732
CERU01100777
49830
Gammaproteobacteria
GGA
Ser
>WENV170283795
CERU01112220
160126
Gammaproteobacteria
CAT
Met
>WENV170283606
CERU01038556
210855
Gammaproteobacteria
ACG
Arg
>WENV170283543
CERU01031833
19344
Gammaproteobacteria
GGA
Ser
>WENV170283574
CERU01036748
260947
Gammaproteobacteria
TTG
Gln
>WENV170283595
CERU01038305
160117
Gammaproteobacteria
ACG
Arg
>WENV170283801
CERU01112268
259002
Gammaproteobacteria
TGT
Thr
>WENV170283572
CERU01036731
474505
Gammaproteobacteria
GCA
Cys
>WENV170283355
CERU01002254
261282
Gammaproteobacteria
TAC
Val
>WENV170283356
CERU01002254
261282
Gammaproteobacteria
TAC
Val
>WENV170283593
CERU01038305
9771
Gammaproteobacteria
GCT
Ser
>WENV170283738
CERU01102232
325641
Gammaproteobacteria
CCA
Trp
>WENV170283744
CERU01103653
448070
Gammaproteobacteria
GCA
Cys
>WENV170283622
CERU01038856
256945
Gammaproteobacteria
GAA
Phe
>WENV170283367
CERU01002965
124716
Gammaproteobacteria
GTA
Tyr
>WENV170283762
CERU01108228
67636
Gammaproteobacteria
CAG
Leu
>WENV170283626
CERU01038883
113788
Gammaproteobacteria
GTA
Tyr
>WENV170283586
CERU01037892
106574
Gammaproteobacteria
TAG
Leu
>WENV170283580
CERU01037367
189269
Gammaproteobacteria
CGG
Pro
>WENV170283522
CERU01028273
105274
Gammaproteobacteria
TAG
Leu
>WENV170283344
CERU01001205
214281
Gammaproteobacteria
ACG
Arg
>WENV170283345
CERU01001205
214281
Gammaproteobacteria
ACG
Arg
>WENV170283346
CERU01001205
214281
Gammaproteobacteria
ACG
Arg
>WENV170283618
CERU01038817
65495
Gammaproteobacteria
GAG
Leu
>WENV170283796
CERU01112220
105406
Gammaproteobacteria
TAG
Leu
>WENV170283612
CERU01038722
160118
Gammaproteobacteria
GTT
Asn
>WENV170283636
CERU01045382
290512
Gammaproteobacteria
TGT
Thr
>WENV170283379
CERU01005108
67081
Gammaproteobacteria
CAA
Leu
>WENV170283614
CERU01038764
160116
Gammaproteobacteria
GAC
Val
>WENV170283369
CERU01003031
159511
Gammaproteobacteria
CCT
Arg
>WENV170283426
CERU01010962
18730
Gammaproteobacteria
GCT
Ser
>WENV170283564
CERU01034842
271670
Gammaproteobacteria
GGT
Thr
>WENV170283591
CERU01038213
271668
Gammaproteobacteria
TGT
Thr
>WENV170283437
CERU01011762
479393
Gammaproteobacteria
GCA
Cys
>WENV170283778
CERU01111053
271669
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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