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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170316531
CESP01052242
165250
Alphaproteobacteria
TGG
Pro
>WENV170317346
CESP01148026
113700
Alphaproteobacteria
>WENV170317477
CESP01159828
148353
Alphaproteobacteria
CAT
Met
>WENV170317322
CESP01144299
338282
Alphaproteobacteria
GTT
Asn
>WENV170316677
CESP01068942
252148
Alphaproteobacteria
TGT
Thr
>WENV170317829
CESP01262482
340106
Alphaproteobacteria
GCC
Gly
>WENV170317190
CESP01126176
167926
Alphaproteobacteria
CAT
Met
>WENV170316443
CESP01043647
167926
Alphaproteobacteria
CAT
Met
>WENV170316816
CESP01083041
254522
Alphaproteobacteria
GAA
Phe
>WENV170316022
CESP01007184
242540
Alphaproteobacteria
TGC
Ala
>WENV170317157
CESP01121704
359842
Alphaproteobacteria
GAC
Val
>WENV170317069
CESP01112392
163860
Alphaproteobacteria
GGG
Pro
>WENV170316878
CESP01090091
160158
Alphaproteobacteria
GAT
Ile
>WENV170316680
CESP01069420
351007
Alphaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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