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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170354537
CETI01136298
165001
Bacteroidota
GTT
Asn
>WENV170355473
CETI01243251
306609
Bacteroidota
GAA
Phe
>WENV170354067
CETI01078944
308806
Bacteroidota
TCC
Gly
>WENV170355373
CETI01237330
416430
Bacteroidota
GCA
Cys
>WENV170355454
CETI01242478
241019
Bacteroidota
CAT
Met
>WENV170355213
CETI01223266
154388
Bacteroidota
GTG
His
>WENV170353268
CETI01006532
96678
Bacteroidota
TAG
Leu
>WENV170354104
CETI01083372
127414
Bacteroidota
TGG
Pro
>WENV170353671
CETI01039438
197220
Bacteroidota
TGT
Thr
>WENV170355531
CETI01245861
193627
Bacteroidota
TCT
Arg
>WENV170355711
CETI01357853
342872
Bacteroidota
GGT
Thr
>WENV170354160
CETI01089794
145555
Bacteroidota
GTC
Asp
>WENV170354318
CETI01108856
48914
Bacteroidota
TGA
Ser
>WENV170354778
CETI01167453
179613
Bacteroidota
CAT
Met
>WENV170354564
CETI01140463
193473
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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