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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170373027
CETS01158245
139286
Bacteroidota
TGG
Pro
>WENV170371644
CETS01027361
308806
Bacteroidota
TCC
Gly
>WENV170371313
CETS01002288
416430
Bacteroidota
GCA
Cys
>WENV170372513
CETS01104901
179643
Bacteroidota
GTC
Asp
>WENV170371569
CETS01021092
172532
Bacteroidota
GTC
Asp
>WENV170373035
CETS01158580
148416
Bacteroidota
GTT
Asn
>WENV170372384
CETS01090590
103881
Bacteroidota
TAG
Leu
>WENV170371863
CETS01046303
154388
Bacteroidota
GTG
His
>WENV170371489
CETS01014975
338625
Bacteroidota
TTC
Glu
>WENV170371488
CETS01014975
338625
Bacteroidota
TTC
Glu
>WENV170372108
CETS01065290
236125
Bacteroidota
GAA
Phe
>WENV170371413
CETS01010313
236125
Bacteroidota
GAA
Phe
>WENV170371956
CETS01052309
60611
Bacteroidota
GCT
Ser
>WENV170371550
CETS01019420
60695
Bacteroidota
GCT
Ser
>WENV170372496
CETS01102975
127414
Bacteroidota
TGG
Pro
>WENV170372497
CETS01103138
190649
Bacteroidota
GTT
Asn
>WENV170371455
CETS01012580
190649
Bacteroidota
GTT
Asn
>WENV170372948
CETS01149717
171336
Bacteroidota
GGC
Ala
>WENV170372963
CETS01151276
274593
Bacteroidota
TTG
Gln
>WENV170372832
CETS01139038
274593
Bacteroidota
TTG
Gln
>WENV170373055
CETS01159728
343033
Bacteroidota
TTC
Glu
>WENV170371299
CETS01001247
259147
Bacteroidota
TTT
Lys
>WENV170372193
CETS01071125
290994
Bacteroidota
CAT
Met
>WENV170371481
CETS01014695
17496
Bacteroidota
GGA
Ser
>WENV170372204
CETS01071797
80676
Bacteroidota
GTA
Tyr
>WENV170372601
CETS01114233
342872
Bacteroidota
GGT
Thr
>WENV170371991
CETS01055379
240684
Bacteroidota
TTT
Lys
>WENV170372801
CETS01135602
165044
Bacteroidota
GTG
His
>WENV170372336
CETS01085001
165044
Bacteroidota
GTG
His
>WENV170372221
CETS01073659
21340
Bacteroidota
GGA
Ser
>WENV170372338
CETS01085754
339882
Bacteroidota
TTC
Glu
>WENV170372305
CETS01082164
185921
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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