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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170402924
CEUF01010553
113700
Alphaproteobacteria
>WENV170402954
CEUF01014672
163860
Alphaproteobacteria
GGG
Pro
>WENV170403031
CEUF01023601
412477
Alphaproteobacteria
GCA
Cys
>WENV170403085
CEUF01032680
359842
Alphaproteobacteria
GAC
Val
>WENV170403155
CEUF01040644
160158
Alphaproteobacteria
GAT
Ile
>WENV170403225
CEUF01051280
144964
Alphaproteobacteria
TGG
Pro
>WENV170403324
CEUF01062163
338282
Alphaproteobacteria
GTT
Asn
>WENV170403404
CEUF01073862
266073
Alphaproteobacteria
TTT
Lys
>WENV170403448
CEUF01080828
369678
Alphaproteobacteria
GGT
Thr
>WENV170403864
CEUF01127644
364406
Alphaproteobacteria
GCC
Gly
>WENV170404013
CEUF01171670
99726
Alphaproteobacteria
TAG
Leu
>WENV170404211
CEUF01257201
339846
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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