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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170408299
CEUI01013773
235837
Gammaproteobacteria
GTT
Asn
>WENV170408540
CEUI01035470
235837
Gammaproteobacteria
GTT
Asn
>WENV170408721
CEUI01055715
235837
Gammaproteobacteria
GTT
Asn
>WENV170408788
CEUI01061365
95633
Gammaproteobacteria
GTA
Tyr
>WENV170409000
CEUI01132767
149035
Gammaproteobacteria
CCG
Arg
>WENV170408428
CEUI01026206
235516
Gammaproteobacteria
GTG
His
>WENV170408429
CEUI01026206
107766
Gammaproteobacteria
TAG
Leu
>WENV170408796
CEUI01062233
144979
Gammaproteobacteria
CGG
Pro
>WENV170408762
CEUI01059126
195519
Gammaproteobacteria
CAT
Met
>WENV170408639
CEUI01050009
149036
Gammaproteobacteria
CCA
Trp
>WENV170408158
CEUI01005773
44886
Gammaproteobacteria
TGA
Ser
>WENV170408431
CEUI01026223
144982
Gammaproteobacteria
TGG
Pro
>WENV170408603
CEUI01043663
426403
Gammaproteobacteria
GCA
Cys
>WENV170408142
CEUI01004936
199268
Gammaproteobacteria
ACG
Arg
>WENV170408499
CEUI01031556
95635
Gammaproteobacteria
CAA
Leu
>WENV170408334
CEUI01015336
62501
Gammaproteobacteria
CAG
Leu
>WENV170408333
CEUI01015336
62501
Gammaproteobacteria
CAG
Leu
>WENV170408580
CEUI01040383
269152
Gammaproteobacteria
GTG
His
>WENV170408953
CEUI01112900
238510
Gammaproteobacteria
GCC
Gly
>WENV170408298
CEUI01013683
338337
Gammaproteobacteria
CCT
Arg
>WENV170408682
CEUI01053037
23396
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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