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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170435195
CEUS01348622
237493
Alphaproteobacteria
CCA
Trp
>WENV170430839
CEUS01007648
281594
Alphaproteobacteria
TGT
Thr
>WENV170431503
CEUS01040260
281594
Alphaproteobacteria
TGT
Thr
>WENV170432439
CEUS01090939
281594
Alphaproteobacteria
TGT
Thr
>WENV170433372
CEUS01169927
281594
Alphaproteobacteria
TGT
Thr
>WENV170434776
CEUS01278483
281594
Alphaproteobacteria
TGT
Thr
>WENV170433392
CEUS01172085
278005
Alphaproteobacteria
>WENV170433917
CEUS01220368
350547
Alphaproteobacteria
GCC
Gly
>WENV170433107
CEUS01145709
339725
Alphaproteobacteria
GAA
Phe
>WENV170435241
CEUS01375213
254522
Alphaproteobacteria
GAA
Phe
>WENV170433668
CEUS01198689
160158
Alphaproteobacteria
GAT
Ile
>WENV170434170
CEUS01240457
340294
Alphaproteobacteria
GGT
Thr
>WENV170432758
CEUS01117185
150356
Alphaproteobacteria
GTC
Asp
>WENV170432017
CEUS01063639
150356
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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