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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170441818
CEUV01290739
299821
Gammaproteobacteria
TTC
Glu
>WENV170441397
CEUV01156595
199859
Gammaproteobacteria
CAT
Met
>WENV170438975
CEUV01005862
338234
Gammaproteobacteria
GAC
Val
>WENV170440688
CEUV01121739
146435
Gammaproteobacteria
TGG
Pro
>WENV170440357
CEUV01092045
279385
Gammaproteobacteria
TTT
Lys
>WENV170439505
CEUV01037099
99112
Gammaproteobacteria
TAG
Leu
>WENV170440863
CEUV01134762
59211
Gammaproteobacteria
TAA
Leu
>WENV170440111
CEUV01070548
154268
Gammaproteobacteria
ACG
Arg
>WENV170439457
CEUV01033737
240642
Gammaproteobacteria
GTT
Asn
>WENV170441182
CEUV01150602
245602
Gammaproteobacteria
TTT
Lys
>WENV170439898
CEUV01057122
245602
Gammaproteobacteria
TTT
Lys
>WENV170440263
CEUV01084083
144952
Gammaproteobacteria
GAT
Ile
>WENV170440246
CEUV01082692
289927
Gammaproteobacteria
GAA
Phe
>WENV170441800
CEUV01288709
238510
Gammaproteobacteria
GCC
Gly
>WENV170439721
CEUV01049172
173040
Gammaproteobacteria
GAC
Val
>WENV170441816
CEUV01290301
341782
Gammaproteobacteria
TTG
Gln
>WENV170439355
CEUV01027509
412373
Gammaproteobacteria
GCA
Cys
>WENV170440119
CEUV01071239
250885
Gammaproteobacteria
TGC
Ala
>WENV170438873
CEUV01000537
195303
Gammaproteobacteria
GAT
Ile
>WENV170440441
CEUV01097799
128930
Gammaproteobacteria
GTC
Asp
>WENV170441206
CEUV01151613
243485
Gammaproteobacteria
TGT
Thr
>WENV170440264
CEUV01084083
262546
Gammaproteobacteria
TGC
Ala
>WENV170441287
CEUV01154518
237421
Gammaproteobacteria
TGT
Thr
>WENV170441487
CEUV01182131
247088
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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