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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170442576
CEUW01048421
312287
Gammaproteobacteria
TGT
Thr
>WENV170442465
CEUW01041502
313881
Gammaproteobacteria
GGC
Ala
>WENV170442187
CEUW01017126
147779
Gammaproteobacteria
CAT
Met
>WENV170443264
CEUW01110812
244202
Gammaproteobacteria
TTT
Lys
>WENV170443106
CEUW01096366
61925
Gammaproteobacteria
TAA
Leu
>WENV170443658
CEUW01252733
145260
Gammaproteobacteria
CAT
Met
>WENV170442240
CEUW01020750
240642
Gammaproteobacteria
GTT
Asn
>WENV170443190
CEUW01098726
149036
Gammaproteobacteria
CCA
Trp
>WENV170442674
CEUW01059235
322642
Gammaproteobacteria
GGT
Thr
>WENV170442244
CEUW01021177
322642
Gammaproteobacteria
GGT
Thr
>WENV170442223
CEUW01019441
240084
Gammaproteobacteria
GGT
Thr
>WENV170443596
CEUW01246396
173040
Gammaproteobacteria
GAC
Val
>WENV170443647
CEUW01251527
77137
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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