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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170443264
CEUW01110812
257895
Gammaproteobacteria
TTT
Lys
>WENV170442828
CEUW01075503
309075
Gammaproteobacteria
GTT
Asn
>WENV170442576
CEUW01048421
319314
Gammaproteobacteria
TGT
Thr
>WENV170443658
CEUW01252733
161428
Gammaproteobacteria
CAT
Met
>WENV170443295
CEUW01132895
282403
Gammaproteobacteria
TTT
Lys
>WENV170443149
CEUW01097900
65736
Gammaproteobacteria
TAA
Leu
>WENV170443158
CEUW01098089
65736
Gammaproteobacteria
TAA
Leu
>WENV170442366
CEUW01031843
451853
Gammaproteobacteria
GCA
Cys
>WENV170443190
CEUW01098726
172986
Gammaproteobacteria
CCA
Trp
>WENV170442049
CEUW01006229
325641
Gammaproteobacteria
CCA
Trp
>WENV170442506
CEUW01045029
107578
Gammaproteobacteria
GAG
Leu
>WENV170442674
CEUW01059235
257590
Gammaproteobacteria
GGT
Thr
>WENV170442705
CEUW01061299
301409
Gammaproteobacteria
TGC
Ala
>WENV170442416
CEUW01036480
471753
Gammaproteobacteria
GCA
Cys
>WENV170443138
CEUW01097421
471753
Gammaproteobacteria
GCA
Cys
>WENV170442223
CEUW01019441
323358
Gammaproteobacteria
GGT
Thr
>WENV170442187
CEUW01017126
161319
Gammaproteobacteria
>WENV170442132
CEUW01013025
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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