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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170507207
CEVX01025833
387387
Cyanobacteriota
GAC
Val
>WENV170507262
CEVX01031735
387387
Cyanobacteriota
GAC
Val
>WENV170507361
CEVX01041584
387387
Cyanobacteriota
GAC
Val
>WENV170507220
CEVX01026865
373624
Cyanobacteriota
TTG
Gln
>WENV170507304
CEVX01035012
237009
Cyanobacteriota
GGC
Ala
>WENV170507979
CEVX01114520
306125
Cyanobacteriota
GTG
His
>WENV170507161
CEVX01022587
25356
Cyanobacteriota
GGA
Ser
>WENV170507486
CEVX01057435
349164
Cyanobacteriota
TGT
Thr
>WENV170508330
CEVX01153675
245150
Cyanobacteriota
GTG
His
>WENV170508166
CEVX01133414
145098
Cyanobacteriota
GGG
Pro
>WENV170508042
CEVX01119934
344607
Cyanobacteriota
CCC
Gly
>WENV170507510
CEVX01059698
344607
Cyanobacteriota
CCC
Gly
>WENV170508292
CEVX01149213
339688
Cyanobacteriota
GAC
Val
>WENV170507133
CEVX01020276
339688
Cyanobacteriota
GAC
Val
>WENV170507212
CEVX01026372
162346
Cyanobacteriota
GGG
Pro
>WENV170507521
CEVX01060424
101255
Cyanobacteriota
TAG
Leu
>WENV170507555
CEVX01063299
11030
Cyanobacteriota
GCT
Ser
>WENV170507693
CEVX01078313
153480
Cyanobacteriota
CAT
Met
>WENV170507401
CEVX01046738
153480
Cyanobacteriota
CAT
Met
>WENV170507766
CEVX01087412
379587
Cyanobacteriota
GTT
Asn
>WENV170507183
CEVX01024168
379587
Cyanobacteriota
GTT
Asn
>WENV170507580
CEVX01065777
147238
Cyanobacteriota
CCG
Arg
>WENV170506948
CEVX01005212
147238
Cyanobacteriota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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