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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170507304
CEVX01035012
323812
Cyanobacteriota
GGC
Ala
>WENV170507220
CEVX01026865
400868
Cyanobacteriota
TTG
Gln
>WENV170506948
CEVX01005212
160110
Cyanobacteriota
CCG
Arg
>WENV170507580
CEVX01065777
160110
Cyanobacteriota
CCG
Arg
>WENV170508239
CEVX01143153
370838
Cyanobacteriota
CCC
Gly
>WENV170508308
CEVX01151199
370838
Cyanobacteriota
CCC
Gly
>WENV170506947
CEVX01005204
161711
Cyanobacteriota
GTC
Asp
>WENV170507922
CEVX01107856
161711
Cyanobacteriota
GTC
Asp
>WENV170508948
CEVX01311671
105816
Cyanobacteriota
CAG
Leu
>WENV170507012
CEVX01010796
258993
Cyanobacteriota
CCA
Trp
>WENV170507979
CEVX01114520
258996
Cyanobacteriota
GTG
His
>WENV170508166
CEVX01133414
161838
Cyanobacteriota
GGG
Pro
>WENV170507207
CEVX01025833
369944
Cyanobacteriota
GAC
Val
>WENV170507262
CEVX01031735
369944
Cyanobacteriota
GAC
Val
>WENV170507361
CEVX01041584
369944
Cyanobacteriota
GAC
Val
>WENV170508330
CEVX01153675
260660
Cyanobacteriota
GTG
His
>WENV170508252
CEVX01144618
310899
Cyanobacteriota
GTG
His
>WENV170507387
CEVX01045962
206160
Cyanobacteriota
CAT
Met
>WENV170507952
CEVX01110717
206160
Cyanobacteriota
CAT
Met
>WENV170508419
CEVX01163663
206160
Cyanobacteriota
CAT
Met
>WENV170507414
CEVX01047595
258998
Cyanobacteriota
CGT
Thr
>WENV170508016
CEVX01119070
258998
Cyanobacteriota
CGT
Thr
>WENV170507212
CEVX01026372
177652
Cyanobacteriota
GGG
Pro
>WENV170507732
CEVX01082823
198772
Cyanobacteriota
CCG
Arg
>WENV170507213
CEVX01026547
284834
Cyanobacteriota
CGC
Ala
>WENV170507183
CEVX01024168
369938
Cyanobacteriota
GTT
Asn
>WENV170507766
CEVX01087412
369938
Cyanobacteriota
GTT
Asn
>WENV170508113
CEVX01127522
267587
Cyanobacteriota
>WENV170507067
CEVX01014485
26568
Cyanobacteriota
TAA
Leu
>WENV170507133
CEVX01020276
370922
Cyanobacteriota
GAC
Val
>WENV170508292
CEVX01149213
370922
Cyanobacteriota
GAC
Val
>WENV170507510
CEVX01059698
370924
Cyanobacteriota
CCC
Gly
>WENV170508042
CEVX01119934
370924
Cyanobacteriota
CCC
Gly
>WENV170507401
CEVX01046738
161765
Cyanobacteriota
CAT
Met
>WENV170507693
CEVX01078313
161765
Cyanobacteriota
CAT
Met
>WENV170507521
CEVX01060424
105814
Cyanobacteriota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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