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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170540029
CWGT01000005
18632
Actinomycetota
GGA
Ser
>WENV170540030
CWGT01000005
18633
Actinomycetota
CGA
Ser
>WENV170540031
CWGT01000005
162414
Actinomycetota
GAT
Ile
>WENV170540033
CWGT01000005
162414
Actinomycetota
GAT
Ile
>WENV170540035
CWGT01000019
105930
Actinomycetota
TAA
Leu
>WENV170540036
CWGT01000024
449079
Actinomycetota
CTG
Gln
>WENV170540038
CWGT01000026
124817
Actinomycetota
TAG
Leu
>WENV170540039
CWGT01000027
162411
Actinomycetota
CCG
Arg
>WENV170540043
CWGT01000045
65500
Actinomycetota
CAA
Leu
>WENV170540044
CWGT01000048
139249
Actinomycetota
GTC
Asp
>WENV170540045
CWGT01000056
26695
Actinomycetota
GAG
Leu
>WENV170540047
CWGT01000056
261299
Actinomycetota
GCC
Gly
>WENV170540048
CWGT01000061
105929
Actinomycetota
GTA
Tyr
>WENV170540049
CWGT01000061
261300
Actinomycetota
GGT
Thr
>WENV170540052
CWGT01000064
26694
Actinomycetota
TGA
Ser
>WENV170540055
CWGT01000069
261298
Actinomycetota
CGT
Thr
>WENV170540056
CWGT01000070
162410
Actinomycetota
TCT
Arg
>WENV170540057
CWGT01000070
371214
Actinomycetota
GTT
Asn
>WENV170540060
CWGT01000075
162413
Actinomycetota
TTC
Glu
>WENV170540062
CWGT01000078
261306
Actinomycetota
>WENV170540063
CWGT01000078
183611
Actinomycetota
GGG
Pro
>WENV170540064
CWGT01000079
371217
Actinomycetota
CAC
Val
>WENV170540065
CWGT01000080
261307
Actinomycetota
TAC
Val
>WENV170540066
CWGT01000080
162417
Actinomycetota
CGG
Pro
>WENV170540067
CWGT01000080
370050
Actinomycetota
TGT
Thr
>WENV170540068
CWGT01000083
261304
Actinomycetota
GAA
Phe
>WENV170540069
CWGT01000083
69295
Actinomycetota
CAG
Leu
>WENV170540075
CWGT01000087
162416
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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