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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170542020
CXPW01000012
338155
Bacteroidota
CTC
Glu
>WENV170542051
CXPW01000228
436206
Bacteroidota
TTG
Gln
>WENV170542026
CXPW01000043
338132
Bacteroidota
GCA
Cys
>WENV170542023
CXPW01000042
301449
Bacteroidota
CGG
Pro
>WENV170542034
CXPW01000073
144933
Bacteroidota
TCT
Arg
>WENV170542052
CXPW01000234
144596
Bacteroidota
GGC
Ala
>WENV170542080
CXPW01001102
80607
Bacteroidota
GTA
Tyr
>WENV170542047
CXPW01000186
80607
Bacteroidota
GTA
Tyr
>WENV170542061
CXPW01000351
16999
Bacteroidota
GGA
Ser
>WENV170542045
CXPW01000159
338165
Bacteroidota
GGT
Thr
>WENV170542058
CXPW01000313
425638
Bacteroidota
CTG
Gln
>WENV170542019
CXPW01000012
23696
Bacteroidota
GCT
Ser
>WENV170542086
CXPW01001400
56823
Bacteroidota
TGA
Ser
>WENV170542083
CXPW01001353
56823
Bacteroidota
TGA
Ser
>WENV170542075
CXPW01000721
56823
Bacteroidota
TGA
Ser
>WENV170542060
CXPW01000346
56823
Bacteroidota
TGA
Ser
>WENV170542055
CXPW01000294
56823
Bacteroidota
TGA
Ser
>WENV170542033
CXPW01000072
56823
Bacteroidota
TGA
Ser
>WENV170542032
CXPW01000071
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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