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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170542019
CXPW01000012
26362
Bacteroidota
GCT
Ser
>WENV170542071
CXPW01000503
65641
Bacteroidota
GAG
Leu
>WENV170542020
CXPW01000012
374505
Bacteroidota
CTC
Glu
>WENV170542018
CXPW01000007
261333
Bacteroidota
CCC
Gly
>WENV170542017
CXPW01000006
20980
Bacteroidota
GGA
Ser
>WENV170542033
CXPW01000072
54039
Bacteroidota
TGA
Ser
>WENV170542055
CXPW01000294
54039
Bacteroidota
TGA
Ser
>WENV170542060
CXPW01000346
54039
Bacteroidota
TGA
Ser
>WENV170542075
CXPW01000721
54039
Bacteroidota
TGA
Ser
>WENV170542083
CXPW01001353
54039
Bacteroidota
TGA
Ser
>WENV170542086
CXPW01001400
54039
Bacteroidota
TGA
Ser
>WENV170542064
CXPW01000405
193541
Bacteroidota
GTT
Asn
>WENV170542052
CXPW01000234
160459
Bacteroidota
GGC
Ala
>WENV170542061
CXPW01000351
21025
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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