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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180010175
FLSC01370513
151860
Fusobacteriota
ACG
Arg
>WENV180009394
FLSC01002547
151857
Fusobacteriota
TCT
Arg
>WENV180010043
FLSC01249807
156827
Fusobacteriota
GTC
Asp
>WENV180009914
FLSC01158759
246241
Fusobacteriota
TGC
Ala
>WENV180010143
FLSC01337141
343015
Fusobacteriota
TTG
Gln
>WENV180010252
FLSC01439525
343015
Fusobacteriota
TTG
Gln
>WENV180010176
FLSC01370513
60218
Fusobacteriota
CAA
Leu
>WENV180010047
FLSC01249807
242891
Fusobacteriota
CTT
Lys
>WENV180009395
FLSC01002547
127801
Fusobacteriota
CAT
Met
>WENV180010007
FLSC01221450
154976
Fusobacteriota
TCG
Arg
>WENV180010198
FLSC01394772
151854
Fusobacteriota
TGG
Pro
>WENV180009677
FLSC01044572
151854
Fusobacteriota
TGG
Pro
>WENV180009393
FLSC01002547
248546
Fusobacteriota
TTT
Lys
>WENV180010048
FLSC01249807
377837
Fusobacteriota
TTC
Glu
>WENV180010045
FLSC01249807
415120
Fusobacteriota
GCA
Cys
>WENV180009798
FLSC01089944
37553
Fusobacteriota
GCT
Ser
>WENV180009396
FLSC01002547
113955
Fusobacteriota
>WENV180009390
FLSC01002547
45759
Fusobacteriota
TAA
Leu
>WENV180010081
FLSC01284383
151861
Fusobacteriota
CCT
Arg
>WENV180009707
FLSC01052738
200772
Fusobacteriota
CAT
Met
>WENV180009338
FLSC01001360
200772
Fusobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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