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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180010595
FLSD01019899
243647
Bacillota
TTT
Lys
>WENV180010842
FLSD01223685
16842
Bacillota
CGA
Ser
>WENV180010690
FLSD01058999
235693
Bacillota
GGT
Thr
>WENV180010696
FLSD01065144
419288
Bacillota
GGT
Thr
>WENV180010815
FLSD01195914
16834
Bacillota
GCT
Ser
>WENV180010845
FLSD01223714
114002
Bacillota
CAA
Leu
>WENV180010855
FLSD01223754
37437
Bacillota
TAA
Leu
>WENV180010597
FLSD01019899
243612
Bacillota
TAC
Val
>WENV180010447
FLSD01000219
243612
Bacillota
TAC
Val
>WENV180010446
FLSD01000219
243612
Bacillota
TAC
Val
>WENV180010639
FLSD01032336
243612
Bacillota
TAC
Val
>WENV180010808
FLSD01185822
147135
Bacillota
ACG
Arg
>WENV180010852
FLSD01223754
250349
Bacillota
GAA
Phe
>WENV180010851
FLSD01223754
235197
Bacillota
GTC
Asp
>WENV180010575
FLSD01013910
243613
Bacillota
GTG
His
>WENV180010438
FLSD01000083
148495
Bacillota
TCT
Arg
>WENV180010691
FLSD01058999
152491
Bacillota
CAT
Met
>WENV180010687
FLSD01058999
273029
Bacillota
TGT
Thr
>WENV180010467
FLSD01000559
178024
Bacillota
TCT
Arg
>WENV180010629
FLSD01028913
413657
Bacillota
CCC
Gly
>WENV180010576
FLSD01013910
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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