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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180025982
FTIR01001432
152292
Betaproteobacteria
TTG
Gln
>WENV180025931
FTIR01000319
145694
Betaproteobacteria
ACG
Arg
>WENV180025999
FTIR01002084
145694
Betaproteobacteria
ACG
Arg
>WENV180026209
FTIR01368310
145694
Betaproteobacteria
ACG
Arg
>WENV180026210
FTIR01368310
145694
Betaproteobacteria
ACG
Arg
>WENV180025905
FTIR01000006
237459
Betaproteobacteria
CTT
Lys
>WENV180025944
FTIR01000534
237459
Betaproteobacteria
CTT
Lys
>WENV180026058
FTIR01012964
237459
Betaproteobacteria
CTT
Lys
>WENV180026228
FTIR01449359
237459
Betaproteobacteria
CTT
Lys
>WENV180026000
FTIR01002091
59085
Betaproteobacteria
TAG
Leu
>WENV180026008
FTIR01002335
59085
Betaproteobacteria
TAG
Leu
>WENV180025907
FTIR01000018
153173
Betaproteobacteria
CAT
Met
>WENV180026034
FTIR01003797
153173
Betaproteobacteria
CAT
Met
>WENV180026229
FTIR01451712
153173
Betaproteobacteria
CAT
Met
>WENV180025914
FTIR01000099
147666
Betaproteobacteria
CAT
Met
>WENV180025960
FTIR01000918
147666
Betaproteobacteria
CAT
Met
>WENV180026029
FTIR01002793
147666
Betaproteobacteria
CAT
Met
>WENV180026021
FTIR01002555
45127
Betaproteobacteria
CGA
Ser
>WENV180026213
FTIR01392054
45127
Betaproteobacteria
CGA
Ser
>WENV180026082
FTIR01030384
45127
Betaproteobacteria
CGA
Ser
>WENV180026049
FTIR01008498
45127
Betaproteobacteria
CGA
Ser
>WENV180026032
FTIR01002917
45127
Betaproteobacteria
CGA
Ser
>WENV180026111
FTIR01082437
236872
Betaproteobacteria
CCA
Trp
>WENV180026001
FTIR01002178
236872
Betaproteobacteria
CCA
Trp
>WENV180026138
FTIR01146262
237240
Betaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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