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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170635452
JDSF01025543
381459
Alphaproteobacteria
CAC
Val
>WENV170635426
JDSF01016608
148200
Alphaproteobacteria
TGG
Pro
>WENV170635384
JDSF01008966
343545
Alphaproteobacteria
CAC
Val
>WENV170635365
JDSF01005752
338282
Alphaproteobacteria
GTT
Asn
>WENV170635344
JDSF01003673
147083
Alphaproteobacteria
GGG
Pro
>WENV170635311
JDSF01001537
307050
Alphaproteobacteria
GGC
Ala
>WENV170635491
JDSF01033656
412279
Alphaproteobacteria
CCC
Gly
>WENV170635470
JDSF01030064
147877
Alphaproteobacteria
GTG
His
>WENV170635359
JDSF01004979
254387
Alphaproteobacteria
TTT
Lys
>WENV170635388
JDSF01010513
338760
Alphaproteobacteria
GAA
Phe
>WENV170635435
JDSF01020208
338288
Alphaproteobacteria
TTC
Glu
>WENV170635445
JDSF01023328
339606
Alphaproteobacteria
>WENV170635385
JDSF01008966
236256
Alphaproteobacteria
TAC
Val
>WENV170635462
JDSF01027933
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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