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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704533
LLEK01003320
306171
Gammaproteobacteria
TGC
Ala
>WENV170704538
LLEK01003351
306171
Gammaproteobacteria
TGC
Ala
>WENV170704515
LLEK01002186
144917
Gammaproteobacteria
>WENV170704529
LLEK01002777
144917
Gammaproteobacteria
>WENV170704432
LLEK01000273
144950
Gammaproteobacteria
GGG
Pro
>WENV170704480
LLEK01001143
235451
Gammaproteobacteria
GTT
Asn
>WENV170704504
LLEK01001721
235451
Gammaproteobacteria
GTT
Asn
>WENV170704521
LLEK01002470
235451
Gammaproteobacteria
GTT
Asn
>WENV170704523
LLEK01002470
235451
Gammaproteobacteria
GTT
Asn
>WENV170704534
LLEK01003320
308314
Gammaproteobacteria
TAC
Val
>WENV170704535
LLEK01003342
308314
Gammaproteobacteria
TAC
Val
>WENV170704506
LLEK01001740
16483
Gammaproteobacteria
TGA
Ser
>WENV170704510
LLEK01001959
95614
Gammaproteobacteria
>WENV170704505
LLEK01001722
95614
Gammaproteobacteria
>WENV170704460
LLEK01000618
95614
Gammaproteobacteria
>WENV170704519
LLEK01002470
235452
Gammaproteobacteria
GAA
Phe
>WENV170704458
LLEK01000615
235448
Gammaproteobacteria
CAT
Met
>WENV170704531
LLEK01002963
411622
Gammaproteobacteria
GCA
Cys
>WENV170704471
LLEK01000783
342890
Gammaproteobacteria
TTG
Gln
>WENV170704508
LLEK01001823
195299
Gammaproteobacteria
CAT
Met
>WENV170704477
LLEK01000987
147027
Gammaproteobacteria
CAT
Met
>WENV170704481
LLEK01001147
44883
Gammaproteobacteria
GGA
Ser
>WENV170704490
LLEK01001324
254534
Gammaproteobacteria
GTG
His
>WENV170704484
LLEK01001213
254534
Gammaproteobacteria
GTG
His
>WENV170704487
LLEK01001235
144914
Gammaproteobacteria
GAC
Val
>WENV170704472
LLEK01000783
95612
Gammaproteobacteria
>WENV170704470
LLEK01000783
95612
Gammaproteobacteria
>WENV170704489
LLEK01001324
144915
Gammaproteobacteria
CCG
Arg
>WENV170704488
LLEK01001241
7168
Gammaproteobacteria
GCT
Ser
>WENV170704463
LLEK01000633
152303
Gammaproteobacteria
TCT
Arg
>WENV170704503
LLEK01001721
235453
Gammaproteobacteria
GAA
Phe
>WENV170704524
LLEK01002590
144916
Gammaproteobacteria
>WENV170704447
LLEK01000474
16250
Gammaproteobacteria
TGA
Ser
>WENV170704446
LLEK01000469
16250
Gammaproteobacteria
TGA
Ser
>WENV170704433
LLEK01000273
16250
Gammaproteobacteria
TGA
Ser
>WENV170704496
LLEK01001391
259339
Gammaproteobacteria
GCC
Gly
>WENV170704482
LLEK01001180
259339
Gammaproteobacteria
GCC
Gly
>WENV170704474
LLEK01000928
259339
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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