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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705644
LNAP01000049
236929
Bacteroidota
TTT
Lys
>WENV170706119
LNAP01001192
236929
Bacteroidota
TTT
Lys
>WENV170706018
LNAP01000844
165001
Bacteroidota
GTT
Asn
>WENV170708030
LNAP01044891
237247
Bacteroidota
TTT
Lys
>WENV170705600
LNAP01000002
338625
Bacteroidota
TTC
Glu
>WENV170705612
LNAP01000020
150103
Bacteroidota
GTG
His
>WENV170708091
LNAP01049612
58714
Bacteroidota
CAA
Leu
>WENV170706874
LNAP01008011
235165
Bacteroidota
CCA
Trp
>WENV170706334
LNAP01002203
44938
Bacteroidota
TGA
Ser
>WENV170705795
LNAP01000339
290994
Bacteroidota
CAT
Met
>WENV170705783
LNAP01000273
152147
Bacteroidota
TCT
Arg
>WENV170706295
LNAP01001896
151121
Bacteroidota
CAT
Met
>WENV170707353
LNAP01018410
368991
Bacteroidota
TTC
Glu
>WENV170708043
LNAP01046139
150485
Bacteroidota
GTT
Asn
>WENV170705690
LNAP01000130
150454
Bacteroidota
TGT
Thr
>WENV170705626
LNAP01000035
150454
Bacteroidota
TGT
Thr
>WENV170706393
LNAP01002817
193473
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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