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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170707353
LNAP01018410
369587
Bacteroidota
TTC
Glu
>WENV170705793
LNAP01000339
369213
Bacteroidota
GCC
Gly
>WENV170705644
LNAP01000049
266737
Bacteroidota
TTT
Lys
>WENV170706119
LNAP01001192
266737
Bacteroidota
TTT
Lys
>WENV170708091
LNAP01049612
65111
Bacteroidota
CAA
Leu
>WENV170706295
LNAP01001896
159589
Bacteroidota
>WENV170705776
LNAP01000260
376218
Bacteroidota
CCT
Arg
>WENV170706509
LNAP01003755
285909
Bacteroidota
CTT
Lys
>WENV170705612
LNAP01000020
160922
Bacteroidota
GTG
His
>WENV170708043
LNAP01046139
161250
Bacteroidota
GTT
Asn
>WENV170706874
LNAP01008011
293347
Bacteroidota
CCA
Trp
>WENV170705627
LNAP01000035
125527
Bacteroidota
GTA
Tyr
>WENV170705645
LNAP01000049
125527
Bacteroidota
GTA
Tyr
>WENV170706334
LNAP01002203
55660
Bacteroidota
TGA
Ser
>WENV170705781
LNAP01000273
68627
Bacteroidota
GCT
Ser
>WENV170705619
LNAP01000023
448855
Bacteroidota
GCA
Cys
>WENV170705783
LNAP01000273
167465
Bacteroidota
TCT
Arg
>WENV170706873
LNAP01008011
402298
Bacteroidota
GGT
Thr
>WENV170708030
LNAP01044891
258386
Bacteroidota
TTT
Lys
>WENV170707450
LNAP01021230
161247
Bacteroidota
CGG
Pro
>WENV170707220
LNAP01015370
175654
Bacteroidota
GAT
Ile
>WENV170708203
LNAP01058391
65274
Bacteroidota
GAG
Leu
>WENV170705646
LNAP01000057
161018
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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