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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180042637
LQAF01016284
238438
Gammaproteobacteria
>WENV180042644
LQAF01016547
238438
Gammaproteobacteria
>WENV180042523
LQAF01001288
235452
Gammaproteobacteria
GAA
Phe
>WENV180042600
LQAF01011105
237709
Gammaproteobacteria
GTG
His
>WENV180042511
LQAF01000663
159514
Gammaproteobacteria
TGG
Pro
>WENV180042526
LQAF01001420
243838
Gammaproteobacteria
TTT
Lys
>WENV180042558
LQAF01004998
44883
Gammaproteobacteria
GGA
Ser
>WENV180042591
LQAF01010102
239650
Gammaproteobacteria
TGT
Thr
>WENV180042521
LQAF01001043
145237
Gammaproteobacteria
CAT
Met
>WENV180042534
LQAF01002396
158933
Gammaproteobacteria
CAT
Met
>WENV180042515
LQAF01000756
158933
Gammaproteobacteria
CAT
Met
>WENV180042510
LQAF01000663
249882
Gammaproteobacteria
GTT
Asn
>WENV180042502
LQAF01000503
45459
Gammaproteobacteria
GGA
Ser
>WENV180042571
LQAF01006219
101644
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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