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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170738519
LULP01000652
144929
Cyanobacteriota
CAT
Met
>WENV170738646
LULP01001523
145761
Cyanobacteriota
GTC
Asp
>WENV170738508
LULP01000588
37357
Cyanobacteriota
TAA
Leu
>WENV170738474
LULP01000373
96363
Cyanobacteriota
TAG
Leu
>WENV170738460
LULP01000341
338782
Cyanobacteriota
GTT
Asn
>WENV170738591
LULP01001070
149253
Cyanobacteriota
ACG
Arg
>WENV170738645
LULP01001523
237899
Cyanobacteriota
CCA
Trp
>WENV170738651
LULP01001546
23971
Cyanobacteriota
TGA
Ser
>WENV170738582
LULP01001001
411836
Cyanobacteriota
TCC
Gly
>WENV170738795
LULP01003987
240100
Cyanobacteriota
CAT
Met
>WENV170738487
LULP01000455
95762
Cyanobacteriota
AAG
Leu
>WENV170738504
LULP01000551
147238
Cyanobacteriota
CCG
Arg
>WENV170739140
LULP01026287
341034
Cyanobacteriota
GGT
Thr
>WENV170738542
LULP01000779
341034
Cyanobacteriota
GGT
Thr
>WENV170738451
LULP01000320
145893
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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