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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170754156
LUML01000390
313881
Gammaproteobacteria
GGC
Ala
>WENV170754273
LUML01001832
149035
Gammaproteobacteria
CCG
Arg
>WENV170754532
LUML01016645
147053
Gammaproteobacteria
GTT
Asn
>WENV170754475
LUML01012003
145260
Gammaproteobacteria
CAT
Met
>WENV170754285
LUML01001957
160030
Gammaproteobacteria
GGG
Pro
>WENV170754186
LUML01000695
185163
Gammaproteobacteria
ACG
Arg
>WENV170754252
LUML01001355
149036
Gammaproteobacteria
CCA
Trp
>WENV170754282
LUML01001872
340801
Gammaproteobacteria
CCT
Arg
>WENV170754476
LUML01012003
97031
Gammaproteobacteria
TAG
Leu
>WENV170754397
LUML01006285
149038
Gammaproteobacteria
TGG
Pro
>WENV170754615
LUML01030423
247974
Gammaproteobacteria
CCA
Trp
>WENV170754421
LUML01007365
59830
Gammaproteobacteria
CAA
Leu
>WENV170754201
LUML01000735
240084
Gammaproteobacteria
GGT
Thr
>WENV170754185
LUML01000695
10767
Gammaproteobacteria
GCT
Ser
>WENV170754407
LUML01006767
128930
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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