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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170755847
LUMO01000071
113700
Alphaproteobacteria
>WENV170756146
LUMO01008103
113700
Alphaproteobacteria
>WENV170756291
LUMO01017699
144964
Alphaproteobacteria
TGG
Pro
>WENV170756225
LUMO01012891
23468
Alphaproteobacteria
GCT
Ser
>WENV170756342
LUMO01023379
23561
Alphaproteobacteria
GGA
Ser
>WENV170756309
LUMO01019042
338282
Alphaproteobacteria
GTT
Asn
>WENV170755851
LUMO01000092
147083
Alphaproteobacteria
GGG
Pro
>WENV170755990
LUMO01001821
339290
Alphaproteobacteria
GGT
Thr
>WENV170756345
LUMO01023623
339454
Alphaproteobacteria
>WENV170756031
LUMO01003034
339722
Alphaproteobacteria
TTG
Gln
>WENV170756370
LUMO01026415
148425
Alphaproteobacteria
ACG
Arg
>WENV170756121
LUMO01006981
147087
Alphaproteobacteria
GTG
His
>WENV170755938
LUMO01000741
147087
Alphaproteobacteria
GTG
His
>WENV170756247
LUMO01014496
235430
Alphaproteobacteria
TTT
Lys
>WENV170756451
LUMO01037885
147088
Alphaproteobacteria
CCT
Arg
>WENV170756068
LUMO01004022
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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