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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170779354
LZQN01002297
147801
Euryarchaeota
TAC
Val
>WENV170779265
LZQN01000096
240396
Euryarchaeota
>WENV170779192
LZQN01000006
341091
Euryarchaeota
>WENV170779278
LZQN01000126
341091
Euryarchaeota
>WENV170779238
LZQN01000038
81228
Euryarchaeota
>WENV170779189
LZQN01000004
412923
Euryarchaeota
CCC
Gly
>WENV170779233
LZQN01000032
127425
Euryarchaeota
CAT
Met
>WENV170779215
LZQN01000017
127422
Euryarchaeota
CTC
Glu
>WENV170779396
LZQN01005624
127180
Euryarchaeota
GTA
Tyr
>WENV170779400
LZQN01006434
147802
Euryarchaeota
CGT
Thr
>WENV170779297
LZQN01000239
127426
Euryarchaeota
GAT
Ile
>WENV170779244
LZQN01000042
341101
Euryarchaeota
GTG
His
>WENV170779240
LZQN01000039
240388
Euryarchaeota
CAC
Val
>WENV170779202
LZQN01000010
127421
Euryarchaeota
TTC
Glu
>WENV170779266
LZQN01000096
149504
Euryarchaeota
TTT
Lys
>WENV170779267
LZQN01000103
412930
Euryarchaeota
TCC
Gly
>WENV170779219
LZQN01000020
341095
Euryarchaeota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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