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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170829868
MDSZ01016108
145694
Betaproteobacteria
ACG
Arg
>WENV170843561
MDSZ01262559
236112
Betaproteobacteria
GAA
Phe
>WENV170839814
MDSZ01192839
256728
Betaproteobacteria
GTT
Asn
>WENV170842264
MDSZ01237074
147851
Betaproteobacteria
TTG
Gln
>WENV170838814
MDSZ01174924
426829
Betaproteobacteria
TCC
Gly
>WENV170842266
MDSZ01237074
4627
Betaproteobacteria
GCT
Ser
>WENV170842151
MDSZ01235189
240604
Betaproteobacteria
TAC
Val
>WENV170830255
MDSZ01023721
17930
Betaproteobacteria
GGA
Ser
>WENV170840725
MDSZ01209831
4869
Betaproteobacteria
GCT
Ser
>WENV170840346
MDSZ01202839
160841
Betaproteobacteria
TTG
Gln
>WENV170836697
MDSZ01135678
236872
Betaproteobacteria
CCA
Trp
>WENV170829857
MDSZ01016108
238002
Betaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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