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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180045388
MOXS02115205
252328
Alphaproteobacteria
TTT
Lys
>WENV180045584
MOXS02146767
252328
Alphaproteobacteria
TTT
Lys
>WENV180045513
MOXS02137518
147089
Alphaproteobacteria
ACG
Arg
>WENV180044836
MOXS02045178
113700
Alphaproteobacteria
>WENV180045039
MOXS02073364
144964
Alphaproteobacteria
TGG
Pro
>WENV180044712
MOXS02028099
338282
Alphaproteobacteria
GTT
Asn
>WENV180045428
MOXS02123133
339722
Alphaproteobacteria
TTG
Gln
>WENV180045250
MOXS02096228
350547
Alphaproteobacteria
GCC
Gly
>WENV180045040
MOXS02073434
339305
Alphaproteobacteria
GGT
Thr
>WENV180045501
MOXS02134863
348781
Alphaproteobacteria
GAA
Phe
>WENV180045465
MOXS02128584
348781
Alphaproteobacteria
GAA
Phe
>WENV180044773
MOXS02037753
348781
Alphaproteobacteria
GAA
Phe
>WENV180045451
MOXS02126773
163860
Alphaproteobacteria
GGG
Pro
>WENV180045073
MOXS02076479
152248
Alphaproteobacteria
TGG
Pro
>WENV180045630
MOXS02153628
412424
Alphaproteobacteria
TCC
Gly
>WENV180045069
MOXS02075579
342846
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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