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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180057800
MPLX02023207
45941
Cyanobacteriota
CGA
Ser
>WENV180058042
MPLX02033077
45941
Cyanobacteriota
CGA
Ser
>WENV180059644
MPLX02123846
373624
Cyanobacteriota
TTG
Gln
>WENV180064182
MPLX02399953
373624
Cyanobacteriota
TTG
Gln
>WENV180057888
MPLX02026885
237009
Cyanobacteriota
GGC
Ala
>WENV180058397
MPLX02052657
237009
Cyanobacteriota
GGC
Ala
>WENV180059733
MPLX02129120
237009
Cyanobacteriota
GGC
Ala
>WENV180059912
MPLX02139185
237009
Cyanobacteriota
GGC
Ala
>WENV180061891
MPLX02251323
237009
Cyanobacteriota
GGC
Ala
>WENV180062616
MPLX02298911
237009
Cyanobacteriota
GGC
Ala
>WENV180063354
MPLX02349639
237009
Cyanobacteriota
GGC
Ala
>WENV180058109
MPLX02036986
267489
Cyanobacteriota
GGC
Ala
>WENV180059560
MPLX02118918
145761
Cyanobacteriota
GTC
Asp
>WENV180060130
MPLX02151928
145761
Cyanobacteriota
GTC
Asp
>WENV180061709
MPLX02240843
145761
Cyanobacteriota
GTC
Asp
>WENV180062075
MPLX02263592
145761
Cyanobacteriota
GTC
Asp
>WENV180064297
MPLX02407355
145761
Cyanobacteriota
GTC
Asp
>WENV180058019
MPLX02032077
349164
Cyanobacteriota
TGT
Thr
>WENV180059642
MPLX02123827
349164
Cyanobacteriota
TGT
Thr
>WENV180061926
MPLX02253869
349164
Cyanobacteriota
TGT
Thr
>WENV180061708
MPLX02240843
237899
Cyanobacteriota
CCA
Trp
>WENV180060129
MPLX02151928
237899
Cyanobacteriota
CCA
Trp
>WENV180058521
MPLX02059718
145098
Cyanobacteriota
GGG
Pro
>WENV180061640
MPLX02238084
153717
Cyanobacteriota
CAT
Met
>WENV180062186
MPLX02270431
153717
Cyanobacteriota
CAT
Met
>WENV180064413
MPLX02415375
344607
Cyanobacteriota
CCC
Gly
>WENV180060818
MPLX02190637
344607
Cyanobacteriota
CCC
Gly
>WENV180058144
MPLX02038558
344607
Cyanobacteriota
CCC
Gly
>WENV180057840
MPLX02024537
344607
Cyanobacteriota
CCC
Gly
>WENV180058670
MPLX02067189
58999
Cyanobacteriota
CAG
Leu
>WENV180058241
MPLX02043562
58999
Cyanobacteriota
CAG
Leu
>WENV180064076
MPLX02392915
252089
Cyanobacteriota
GTG
His
>WENV180062440
MPLX02286765
252089
Cyanobacteriota
GTG
His
>WENV180058672
MPLX02067189
252089
Cyanobacteriota
GTG
His
>WENV180057949
MPLX02029292
252089
Cyanobacteriota
GTG
His
>WENV180059908
MPLX02138952
148812
Cyanobacteriota
CGG
Pro
>WENV180063939
MPLX02383951
101255
Cyanobacteriota
TAG
Leu
>WENV180061632
MPLX02237218
101255
Cyanobacteriota
TAG
Leu
>WENV180059893
MPLX02138700
101255
Cyanobacteriota
TAG
Leu
>WENV180064176
MPLX02399339
11030
Cyanobacteriota
GCT
Ser
>WENV180060690
MPLX02184146
11030
Cyanobacteriota
GCT
Ser
>WENV180058659
MPLX02066772
11030
Cyanobacteriota
GCT
Ser
>WENV180060282
MPLX02160729
153480
Cyanobacteriota
CAT
Met
>WENV180058497
MPLX02057125
153480
Cyanobacteriota
CAT
Met
>WENV180063916
MPLX02383062
379587
Cyanobacteriota
GTT
Asn
>WENV180062060
MPLX02262688
379587
Cyanobacteriota
GTT
Asn
>WENV180060919
MPLX02195859
379587
Cyanobacteriota
GTT
Asn
>WENV180059368
MPLX02108692
379587
Cyanobacteriota
GTT
Asn
>WENV180058932
MPLX02081626
379587
Cyanobacteriota
GTT
Asn
>WENV180057621
MPLX02014702
379587
Cyanobacteriota
GTT
Asn
>WENV180062254
MPLX02274893
147238
Cyanobacteriota
CCG
Arg
>WENV180058237
MPLX02043475
147238
Cyanobacteriota
CCG
Arg
>WENV180057939
MPLX02029085
147238
Cyanobacteriota
CCG
Arg
>WENV180060004
MPLX02145253
153271
Cyanobacteriota
TCT
Arg
>WENV180064191
MPLX02400252
275071
Cyanobacteriota
CCA
Trp
>WENV180062409
MPLX02284405
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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