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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180063168
MPLX02335589
340011
Gammaproteobacteria
TTG
Gln
>WENV180061321
MPLX02217939
248041
Gammaproteobacteria
GGC
Ala
>WENV180062582
MPLX02296706
236366
Gammaproteobacteria
GTG
His
>WENV180062634
MPLX02299876
236366
Gammaproteobacteria
GTG
His
>WENV180063425
MPLX02353428
153865
Gammaproteobacteria
CCG
Arg
>WENV180064203
MPLX02401513
16284
Gammaproteobacteria
TGA
Ser
>WENV180060503
MPLX02172824
95590
Gammaproteobacteria
>WENV180059048
MPLX02087898
95750
Gammaproteobacteria
TAG
Leu
>WENV180063086
MPLX02330050
152301
Gammaproteobacteria
GAT
Ile
>WENV180062463
MPLX02288674
150587
Gammaproteobacteria
CAT
Met
>WENV180062549
MPLX02294648
62501
Gammaproteobacteria
CAG
Leu
>WENV180064256
MPLX02403800
247974
Gammaproteobacteria
CCA
Trp
>WENV180063817
MPLX02377183
247974
Gammaproteobacteria
CCA
Trp
>WENV180061054
MPLX02205202
247974
Gammaproteobacteria
CCA
Trp
>WENV180060765
MPLX02188094
247974
Gammaproteobacteria
CCA
Trp
>WENV180058251
MPLX02044083
173040
Gammaproteobacteria
GAC
Val
>WENV180063979
MPLX02386551
145713
Gammaproteobacteria
CAT
Met
>WENV180059784
MPLX02132058
411842
Gammaproteobacteria
GCA
Cys
>WENV180059783
MPLX02132045
411842
Gammaproteobacteria
GCA
Cys
>WENV180063600
MPLX02363677
411842
Gammaproteobacteria
GCA
Cys
>WENV180062836
MPLX02312590
411842
Gammaproteobacteria
GCA
Cys
>WENV180062280
MPLX02277481
411842
Gammaproteobacteria
GCA
Cys
>WENV180064127
MPLX02396430
250885
Gammaproteobacteria
TGC
Ala
>WENV180059056
MPLX02088232
250885
Gammaproteobacteria
TGC
Ala
>WENV180061213
MPLX02212189
425813
Gammaproteobacteria
GCA
Cys
>WENV180059603
MPLX02121168
195303
Gammaproteobacteria
GAT
Ile
>WENV180059424
MPLX02111865
195303
Gammaproteobacteria
GAT
Ile
>WENV180057610
MPLX02014258
195303
Gammaproteobacteria
GAT
Ile
>WENV180061497
MPLX02228363
128930
Gammaproteobacteria
GTC
Asp
>WENV180058090
MPLX02035674
128930
Gammaproteobacteria
GTC
Asp
>WENV180057961
MPLX02029954
128930
Gammaproteobacteria
GTC
Asp
>WENV180057821
MPLX02023921
128930
Gammaproteobacteria
GTC
Asp
>WENV180057343
MPLX02000109
128930
Gammaproteobacteria
GTC
Asp
>WENV180064281
MPLX02406170
243485
Gammaproteobacteria
TGT
Thr
>WENV180061609
MPLX02235281
262546
Gammaproteobacteria
TGC
Ala
>WENV180060328
MPLX02162618
247088
Gammaproteobacteria
CCA
Trp
>WENV180058046
MPLX02033324
101786
Gammaproteobacteria
GAG
Leu
>WENV180064361
MPLX02411286
198797
Gammaproteobacteria
TGG
Pro
>WENV180063599
MPLX02363677
270352
Gammaproteobacteria
GCC
Gly
>WENV180063121
MPLX02332142
270352
Gammaproteobacteria
GCC
Gly
>WENV180062279
MPLX02277481
270352
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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