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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180099392
NMRC01001370
146896
Betaproteobacteria
TTG
Gln
>WENV180099668
NMRC01022289
239252
Betaproteobacteria
TTT
Lys
>WENV180099477
NMRC01007682
412167
Betaproteobacteria
GCA
Cys
>WENV180099585
NMRC01019883
251462
Betaproteobacteria
GCC
Gly
>WENV180099513
NMRC01010447
237459
Betaproteobacteria
CTT
Lys
>WENV180099512
NMRC01010447
249068
Betaproteobacteria
CGC
Ala
>WENV180099442
NMRC01004697
243641
Betaproteobacteria
TAC
Val
>WENV180099482
NMRC01007877
372150
Betaproteobacteria
CAC
Val
>WENV180099465
NMRC01006561
412095
Betaproteobacteria
GCA
Cys
>WENV180099589
NMRC01020089
95934
Betaproteobacteria
GAG
Leu
>WENV180099737
NMRC01026235
239140
Betaproteobacteria
TTT
Lys
>WENV180099679
NMRC01022534
144934
Betaproteobacteria
TTG
Gln
>WENV180099456
NMRC01005273
254339
Betaproteobacteria
GTG
His
>WENV180099418
NMRC01002986
95872
Betaproteobacteria
CAA
Leu
>WENV180099461
NMRC01006348
247446
Betaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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