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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180108762
OAPH01279744
235449
Gammaproteobacteria
>WENV180108647
OAPH01224703
199859
Gammaproteobacteria
CAT
Met
>WENV180108398
OAPH01106507
236480
Gammaproteobacteria
GTG
His
>WENV180107764
OAPH01006108
149035
Gammaproteobacteria
CCG
Arg
>WENV180108305
OAPH01088106
249887
Gammaproteobacteria
GGT
Thr
>WENV180107999
OAPH01027987
147053
Gammaproteobacteria
GTT
Asn
>WENV180108521
OAPH01160488
160030
Gammaproteobacteria
GGG
Pro
>WENV180108676
OAPH01243132
46594
Gammaproteobacteria
GGA
Ser
>WENV180108404
OAPH01108511
147647
Gammaproteobacteria
CAT
Met
>WENV180107923
OAPH01019411
154268
Gammaproteobacteria
ACG
Arg
>WENV180108000
OAPH01028088
149036
Gammaproteobacteria
CCA
Trp
>WENV180108634
OAPH01215322
245602
Gammaproteobacteria
TTT
Lys
>WENV180108696
OAPH01252687
322642
Gammaproteobacteria
GGT
Thr
>WENV180108040
OAPH01035271
322642
Gammaproteobacteria
GGT
Thr
>WENV180108146
OAPH01048991
144952
Gammaproteobacteria
GAT
Ile
>WENV180108258
OAPH01077844
148148
Gammaproteobacteria
GAC
Val
>WENV180107771
OAPH01006593
145261
Gammaproteobacteria
CAT
Met
>WENV180108408
OAPH01109147
147054
Gammaproteobacteria
CAT
Met
>WENV180108427
OAPH01113868
411622
Gammaproteobacteria
GCA
Cys
>WENV180108462
OAPH01126986
237221
Gammaproteobacteria
GGC
Ala
>WENV180108613
OAPH01207046
195299
Gammaproteobacteria
CAT
Met
>WENV180108619
OAPH01208605
97031
Gammaproteobacteria
TAG
Leu
>WENV180108395
OAPH01106507
97031
Gammaproteobacteria
TAG
Leu
>WENV180108453
OAPH01125006
252289
Gammaproteobacteria
TTT
Lys
>WENV180108396
OAPH01106507
149038
Gammaproteobacteria
TGG
Pro
>WENV180108342
OAPH01097549
350324
Gammaproteobacteria
TTG
Gln
>WENV180108341
OAPH01097549
96362
Gammaproteobacteria
TAG
Leu
>WENV180107838
OAPH01011849
294663
Gammaproteobacteria
TTC
Glu
>WENV180108241
OAPH01072572
319098
Gammaproteobacteria
TAC
Val
>WENV180107829
OAPH01010852
10767
Gammaproteobacteria
GCT
Ser
>WENV180108429
OAPH01115184
313860
Gammaproteobacteria
GGC
Ala
>WENV180108595
OAPH01196641
59658
Gammaproteobacteria
CAA
Leu
>WENV180108487
OAPH01138159
149037
Gammaproteobacteria
GAC
Val
>WENV180108663
OAPH01233133
179790
Gammaproteobacteria
CAT
Met
>WENV180108473
OAPH01131810
16460
Gammaproteobacteria
TGA
Ser
>WENV180108559
OAPH01178593
198797
Gammaproteobacteria
TGG
Pro
>WENV180108614
OAPH01207046
240085
Gammaproteobacteria
GCC
Gly
>WENV180108426
OAPH01113868
58757
Gammaproteobacteria
>WENV180108646
OAPH01224703
339945
Gammaproteobacteria
TTG
Gln
>WENV180108641
OAPH01221764
73305
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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