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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180115561
OAPT01007645
113700
Alphaproteobacteria
>WENV180115648
OAPT01015710
23561
Alphaproteobacteria
GGA
Ser
>WENV180116131
OAPT01145031
147083
Alphaproteobacteria
GGG
Pro
>WENV180116268
OAPT01218315
147334
Alphaproteobacteria
CAT
Met
>WENV180116194
OAPT01178115
147085
Alphaproteobacteria
CCG
Arg
>WENV180115741
OAPT01028061
147087
Alphaproteobacteria
GTG
His
>WENV180115594
OAPT01009959
412424
Alphaproteobacteria
TCC
Gly
>WENV180115731
OAPT01025431
150356
Alphaproteobacteria
GTC
Asp
>WENV180115598
OAPT01010383
150356
Alphaproteobacteria
GTC
Asp
>WENV180116238
OAPT01201664
342846
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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