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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180115617
OAPT01012534
126966
Bacteroidota
TAC
Val
>WENV180115549
OAPT01006692
236125
Bacteroidota
GAA
Phe
>WENV180116090
OAPT01124989
236125
Bacteroidota
GAA
Phe
>WENV180115856
OAPT01049756
60611
Bacteroidota
GCT
Ser
>WENV180115722
OAPT01024732
127414
Bacteroidota
TGG
Pro
>WENV180115893
OAPT01059997
235165
Bacteroidota
CCA
Trp
>WENV180115427
OAPT01001019
343033
Bacteroidota
TTC
Glu
>WENV180115931
OAPT01069490
59930
Bacteroidota
GCT
Ser
>WENV180115679
OAPT01019486
113694
Bacteroidota
GTA
Tyr
>WENV180115971
OAPT01083559
412187
Bacteroidota
>WENV180115423
OAPT01000757
153768
Bacteroidota
TGC
Ala
>WENV180115468
OAPT01003136
240901
Bacteroidota
TTT
Lys
>WENV180115467
OAPT01003136
240901
Bacteroidota
TTT
Lys
>WENV180116156
OAPT01156559
148047
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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