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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180115638
OAPT01014737
236930
Cyanobacteriota
CGC
Ala
>WENV180115568
OAPT01008358
237009
Cyanobacteriota
GGC
Ala
>WENV180115941
OAPT01073372
144929
Cyanobacteriota
CAT
Met
>WENV180116219
OAPT01188985
145761
Cyanobacteriota
GTC
Asp
>WENV180115484
OAPT01003832
339686
Cyanobacteriota
TAC
Val
>WENV180116003
OAPT01093307
338782
Cyanobacteriota
GTT
Asn
>WENV180116159
OAPT01157867
149253
Cyanobacteriota
ACG
Arg
>WENV180115566
OAPT01007843
245150
Cyanobacteriota
GTG
His
>WENV180115493
OAPT01003991
237899
Cyanobacteriota
CCA
Trp
>WENV180116233
OAPT01197575
339688
Cyanobacteriota
GAC
Val
>WENV180115851
OAPT01048075
58999
Cyanobacteriota
CAG
Leu
>WENV180115647
OAPT01015685
11030
Cyanobacteriota
GCT
Ser
>WENV180115632
OAPT01013942
37223
Cyanobacteriota
TAA
Leu
>WENV180115398
OAPT01000312
147238
Cyanobacteriota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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