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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180115629
OAPT01013680
236366
Gammaproteobacteria
GTG
His
>WENV180116134
OAPT01145224
153865
Gammaproteobacteria
CCG
Arg
>WENV180115864
OAPT01052261
59211
Gammaproteobacteria
TAA
Leu
>WENV180115972
OAPT01083632
44872
Gammaproteobacteria
GGA
Ser
>WENV180116062
OAPT01113876
95907
Gammaproteobacteria
GTA
Tyr
>WENV180116064
OAPT01113876
235344
Gammaproteobacteria
GGT
Thr
>WENV180115583
OAPT01008934
412476
Gammaproteobacteria
TCC
Gly
>WENV180115852
OAPT01048502
145713
Gammaproteobacteria
CAT
Met
>WENV180115417
OAPT01000586
411842
Gammaproteobacteria
GCA
Cys
>WENV180115634
OAPT01014503
59460
Gammaproteobacteria
CAA
Leu
>WENV180116221
OAPT01190331
243485
Gammaproteobacteria
TGT
Thr
>WENV180115590
OAPT01009740
245151
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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