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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180139138
OATS01000039
144657
Bacteroidota
CGG
Pro
>WENV180139121
OATS01000025
339341
Bacteroidota
GGT
Thr
>WENV180139134
OATS01000034
343138
Bacteroidota
CCT
Arg
>WENV180139104
OATS01000008
58715
Bacteroidota
GAG
Leu
>WENV180139144
OATS01000041
46165
Bacteroidota
TGA
Ser
>WENV180139151
OATS01000045
338486
Bacteroidota
CAT
Met
>WENV180139158
OATS01000064
338486
Bacteroidota
CAT
Met
>WENV180139131
OATS01000033
415410
Bacteroidota
TTG
Gln
>WENV180139141
OATS01000039
59689
Bacteroidota
CAG
Leu
>WENV180139103
OATS01000008
59689
Bacteroidota
CAG
Leu
>WENV180139204
OATS01000141
235203
Bacteroidota
TTT
Lys
>WENV180139189
OATS01000120
235203
Bacteroidota
TTT
Lys
>WENV180139146
OATS01000041
238121
Bacteroidota
CTT
Lys
>WENV180139145
OATS01000041
238121
Bacteroidota
CTT
Lys
>WENV180139224
OATS01000186
338132
Bacteroidota
GCA
Cys
>WENV180139176
OATS01000079
338132
Bacteroidota
GCA
Cys
>WENV180139147
OATS01000041
45423
Bacteroidota
TGA
Ser
>WENV180139129
OATS01000032
58714
Bacteroidota
CAA
Leu
>WENV180139179
OATS01000083
144933
Bacteroidota
TCT
Arg
>WENV180139201
OATS01000138
144659
Bacteroidota
GTG
His
>WENV180139200
OATS01000138
144659
Bacteroidota
GTG
His
>WENV180139139
OATS01000039
235180
Bacteroidota
CCA
Trp
>WENV180139122
OATS01000025
235180
Bacteroidota
CCA
Trp
>WENV180139174
OATS01000076
80607
Bacteroidota
GTA
Tyr
>WENV180139172
OATS01000075
80614
Bacteroidota
>WENV180139171
OATS01000073
80614
Bacteroidota
>WENV180139120
OATS01000025
80614
Bacteroidota
>WENV180139133
OATS01000034
338164
Bacteroidota
TTC
Glu
>WENV180139132
OATS01000034
338164
Bacteroidota
TTC
Glu
>WENV180139130
OATS01000032
95875
Bacteroidota
TAG
Leu
>WENV180139246
OATS01000384
240012
Bacteroidota
CCC
Gly
>WENV180139110
OATS01000014
147439
Bacteroidota
TCT
Arg
>WENV180139198
OATS01000136
411550
Bacteroidota
CTG
Gln
>WENV180139184
OATS01000107
338165
Bacteroidota
GGT
Thr
>WENV180139205
OATS01000150
23696
Bacteroidota
GCT
Ser
>WENV180139153
OATS01000049
338125
Bacteroidota
CCT
Arg
>WENV180139166
OATS01000068
235129
Bacteroidota
GCC
Gly
>WENV180139164
OATS01000068
235129
Bacteroidota
GCC
Gly
>WENV180139102
OATS01000008
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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