This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180146532
OAUF01000649
119661
Verrucomicrobiota
CAA
Leu
>WENV180146409
OAUF01000298
155256
Verrucomicrobiota
TCT
Arg
>WENV180146410
OAUF01000301
246701
Verrucomicrobiota
TTT
Lys
>WENV180146286
OAUF01000108
345141
Verrucomicrobiota
TTG
Gln
>WENV180146266
OAUF01000094
345133
Verrucomicrobiota
GAC
Val
>WENV180146366
OAUF01000204
82054
Verrucomicrobiota
GTA
Tyr
>WENV180146353
OAUF01000186
246677
Verrucomicrobiota
CTT
Lys
>WENV180146352
OAUF01000186
246677
Verrucomicrobiota
CTT
Lys
>WENV180146230
OAUF01000046
344844
Verrucomicrobiota
GCA
Cys
>WENV180146272
OAUF01000100
155264
Verrucomicrobiota
GGG
Pro
>WENV180146327
OAUF01000155
344845
Verrucomicrobiota
CTG
Gln
>WENV180146326
OAUF01000155
128202
Verrucomicrobiota
GTC
Asp
>WENV180146246
OAUF01000062
128202
Verrucomicrobiota
GTC
Asp
>WENV180146395
OAUF01000268
414625
Verrucomicrobiota
CCC
Gly
>WENV180146300
OAUF01000120
46246
Verrucomicrobiota
TGA
Ser
>WENV180146429
OAUF01000357
246700
Verrucomicrobiota
TTC
Glu
>WENV180146231
OAUF01000046
246700
Verrucomicrobiota
TTC
Glu
>WENV180146233
OAUF01000046
246687
Verrucomicrobiota
CGC
Ala
>WENV180146394
OAUF01000268
419909
Verrucomicrobiota
TCC
Gly
>WENV180146414
OAUF01000321
344841
Verrucomicrobiota
CAC
Val
>WENV180146408
OAUF01000296
60880
Verrucomicrobiota
CAG
Leu
>WENV180146536
OAUF01000697
82056
Verrucomicrobiota
TAA
Leu
>WENV180146351
OAUF01000186
344842
Verrucomicrobiota
CGT
Thr
>WENV180146463
OAUF01000405
170105
Verrucomicrobiota
CAT
Met
>WENV180146481
OAUF01000444
287733
Verrucomicrobiota
CCA
Trp
>WENV180146232
OAUF01000046
345123
Verrucomicrobiota
TGT
Thr
>WENV180146554
OAUF01000825
345110
Verrucomicrobiota
CCT
Arg
>WENV180146430
OAUF01000357
344839
Verrucomicrobiota
GTG
His
>WENV180146484
OAUF01000450
7274
Verrucomicrobiota
CGA
Ser
>WENV180146537
OAUF01000697
246260
Verrucomicrobiota
>WENV180146350
OAUF01000186
155268
Verrucomicrobiota
CGG
Pro
>WENV180146229
OAUF01000046
82181
Verrucomicrobiota
AAG
Leu
>WENV180146464
OAUF01000407
246728
Verrucomicrobiota
GAA
Phe
>WENV180146538
OAUF01000697
7256
Verrucomicrobiota
GCT
Ser
>WENV180146299
OAUF01000120
345115
Verrucomicrobiota
CAT
Met
>WENV180146267
OAUF01000094
345119
Verrucomicrobiota
TAC
Val
>WENV180146365
OAUF01000204
345124
Verrucomicrobiota
GTT
Asn
>WENV180146247
OAUF01000062
17023
Verrucomicrobiota
GGA
Ser
>WENV180146428
OAUF01000357
368497
Verrucomicrobiota
GCC
Gly
>WENV180146400
OAUF01000280
368497
Verrucomicrobiota
GCC
Gly
>WENV180146396
OAUF01000268
345142
Verrucomicrobiota
CCG
Arg
>WENV180146431
OAUF01000357
246709
Verrucomicrobiota
CAT
Met
>WENV180146465
OAUF01000407
154693
Verrucomicrobiota
TGG
Pro
>WENV180146480
OAUF01000444
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK